STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6RU5325S rRNA (Cytosine-C(5))-methyltransferase nop2-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (179 aa)    
Predicted Functional Partners:
A0A3L6TCC5
Uncharacterized protein.
   
 
 0.991
A0A3L6PN97
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.976
A0A3L6RF41
RRM domain-containing protein.
   
 
 0.976
A0A3L6SRI0
CCAAT/enhancer-binding protein zeta.
   
 
 0.976
A0A3L6QNR8
Uncharacterized protein.
  
 
 0.973
A0A3L6QQX0
RL10P_insert domain-containing protein.
  
 
 0.973
A0A3L6R4N8
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
  
 
 0.964
A0A3L6T2A4
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
  
 
 0.964
A0A3L6TPG2
Ribosomal RNA large subunit methyltransferase E.
  
 
 0.964
A0A3L6SG38
Uncharacterized protein.
   
 
 0.963
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.