STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6S5I4HTH myb-type domain-containing protein. (238 aa)    
Predicted Functional Partners:
A0A3L6PW30
COP9 signalosome complex subunit 5b-like.
   
  0.604
A0A3L6Q9X5
COP9 signalosome complex subunit 5b-like.
   
  0.604
A0A3L6QH17
Cullin-associated NEDD8-dissociated protein 1.
   
  0.599
A0A3L6RQU5
Cullin-associated NEDD8-dissociated protein 1.
   
  0.599
A0A3L6QVD5
Interferon developmental regulator family.
    
 0.589
A0A3L6RWH9
IFRD domain-containing protein.
    
 0.589
A0A3L6S7C7
IFRD domain-containing protein.
    
 0.589
A0A3L6TQW2
IFRD domain-containing protein.
    
 0.589
A0A3L6SD67
Uncharacterized protein.
    
 0.588
A0A3L6SDR9
Uncharacterized protein.
    
 0.588
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.