STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6S641THUMP domain-containing protein. (448 aa)    
Predicted Functional Partners:
A0A3L6S8P4
Uncharacterized protein.
   
  
 0.456
A0A3L6TN66
Uncharacterized protein.
   
  
 0.456
A0A3L6RYL3
Alba domain-containing protein.
      
 0.446
A0A3L6PTE7
SAM domain-containing protein.
      
 0.443
A0A3L6PVK8
Ankyrin repeat and SAM domain-containing protein 6-like isoform X1.
      
 0.443
A0A3L6RFE2
Ankyrin repeat and SAM domain-containing protein 6-like isoform X1.
      
 0.443
A0A3L6PQQ9
NUC173 domain-containing protein.
      
 0.432
A0A3L6ST25
NUC173 domain-containing protein.
      
 0.432
A0A3L6PVC4
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
      
 0.431
A0A3L6R3G3
tRNA-aminoacylation cofactor ARC1.
      
 0.431
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.