STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6SJK4Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
A0A3L6THI0
RRM domain-containing protein.
    
 
 0.880
A0A3L6QVD6
Uncharacterized protein.
    
 
 0.807
A0A3L6TA44
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.807
A0A3L6QH28
Splicing factor 3B subunit 1.
    
 
 0.722
A0A3L6RNV2
Splicing factor 3B subunit 1.
    
 
 0.722
A0A3L6QGA0
Splicing factor 3B subunit 3-like.
    
 
 0.684
A0A3L6QU05
Splicing factor 3B subunit 3 isoform X1.
    
 
 0.684
A0A3L6RQ57
Splicing factor 3B subunit 3.
    
 
 0.684
A0A3L6SBM6
Splicing factor 3B subunit 3-like.
    
 
 0.684
A0A3L6TGM0
Splicing factor 3B subunit 3 isoform X1.
    
 
 0.684
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.