STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6SM67Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (471 aa)    
Predicted Functional Partners:
A0A3L6R0W0
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.976
A0A3L6SKQ7
Glycine dehydrogenase (Decarboxylating), mitochondrial-like.
  
 
 0.976
A0A3L6PQP1
Bifunctional purine biosynthesis protein PurH-like isoform X1.
  
 0.975
A0A3L6RIW8
Bifunctional purine biosynthesis protein PurH-like isoform X1.
  
 0.975
A0A3L6QPP3
Bifunctional purine biosynthesis protein PurH-like.
  
 0.972
A0A3L6TAF9
Bifunctional purine biosynthesis protein PurH-like.
  
 0.972
A0A3L6QTE1
Formate--tetrahydrofolate ligase.
  
 0.967
A0A3L6T9A2
Formate--tetrahydrofolate ligase.
  
 0.967
A0A3L6PIT7
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.962
A0A3L6PUB4
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.962
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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