STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6SV52Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
A0A3L6SQI6
Uncharacterized protein.
  
     0.509
A0A3L6QGK6
Transcription factor IBH1-like.
  
     0.484
A0A3L6S302
Uncharacterized protein.
      
 0.478
A0A3L6S2Y1
Putative F-box protein.
  
     0.477
A0A3L6QEH9
Uncharacterized protein.
  
     0.453
A0A3L6S0K8
Uncharacterized protein.
  
     0.453
A0A3L6Q4I3
MADS-box transcription factor.
  
     0.450
A0A3L6RRT1
Transcription factor IBH1-like.
  
     0.438
A0A3L6RVL2
WEB family protein.
  
     0.436
A0A3L6PCK4
Uncharacterized protein.
  
     0.432
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.