STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF11880.1Hypothetical protein. (655 aa)    
Predicted Functional Partners:
SDF11847.1
Protein of unknown function.
       0.671
SDE82299.1
Por secretion system C-terminal sorting domain-containing protein.
  
 0.644
SDF22202.1
Hypothetical protein.
  
     0.607
SDF65650.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.554
SDE75332.1
Hypothetical protein.
  
 
   0.547
SDF27387.1
Hypothetical protein.
  
     0.527
SDF70854.1
Hypothetical protein.
  
     0.527
SDF24217.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.489
SDG42851.1
Hypothetical protein.
  
     0.480
SDF11921.1
Hypothetical protein.
       0.476
Your Current Organism:
Chryseobacterium hungaricum
NCBI taxonomy Id: 454006
Other names: C. hungaricum, Chryseobacterium hungaricum Szoboszlay et al. 2008, DSM 19684, NCAIM B2269, strain CHB-20p
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.