STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL08887Putative DUF907 domain protein. (324 aa)    
Predicted Functional Partners:
ASPCAL09105
Putative Peroxin 7.
    
 0.709
ASPCAL11526
Putative Tetratricopeptide repeat protein.
    
 0.650
ASPCAL08299
Putative Peroxisome biosynthesis protein (Peroxin-10).
     
 0.599
ASPCAL11515
Putative Peroxisomal membrane protein.
     
 0.594
ASPCAL11963
Putative Peroxisome biosynthesis protein (PAS10/Peroxin-12).
     
 0.583
ASPCAL08788
Putative Aminotransferase.
    
 0.527
ASPCAL06672
Putative Nuclear protein.
    
  0.519
ASPCAL06492
Putative FACL062Cp.
    
  0.519
ASPCAL11097
Putative Microbody (Peroxisome) biogenesis protein peroxin 14 (Eurofung).
    
 0.515
ASPCAL03667
Putative Transcription factor bzip.
    
  0.503
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.