STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL00706Putative Translation initiation factor 4F. (1476 aa)    
Predicted Functional Partners:
ASPCAL09791
Putative Cap binding protein (AFU_orthologue AFUA_7G01480); Belongs to the eukaryotic initiation factor 4E family.
   
 0.985
ASPCAL10397
Putative ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.983
ASPCAL12172
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.943
ASPCAL02715
Putative Translation initiation factor eIF4E3; Belongs to the eukaryotic initiation factor 4E family.
    
 0.929
ASPCAL07871
Putative Elongation factor 3.
   
 
 0.893
ASPCAL12012
Putative RRM domain.
   
 0.888
ASPCAL01164
Putative Nuclear cap-binding complex.
   
 0.883
ASPCAL00474
Nuclear cap-binding protein subunit 2.
    
 0.860
ASPCAL08255
Uncharacterized protein.
    
 0.825
ASPCAL09402
Putative Possible translation initiation factor; Belongs to the eukaryotic initiation factor 4E family.
    
 0.825
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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