STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL03564Uncharacterized protein. (116 aa)    
Predicted Functional Partners:
ASPCAL03904
Putative Nucleoporin Nsp1.
     
 0.977
ASPCAL02735
Putative Histone acetyltransferase type B subunit 2.
   
 0.935
ASPCAL09880
Histone H2B; Belongs to the histone H2B family.
    
 0.881
ASPCAL05506
Uncharacterized protein.
    
 0.857
ASPCAL06460
Putative Chromatin modification-related protein eaf3.
    
 0.856
ASPCAL07919
Putative 2,3-diketo-5-methylthio-1-phosphopentane phosphatase.
    
 0.853
ASPCAL10735
Putative Deacetylase complex subunit Sds3.
    
 0.853
ASPCAL15125
Protein kinase domain-containing protein.
    
 0.851
ASPCAL02063
Putative Stress response regulator/HFS transcription factor.
    
 0.845
ASPCAL02263
Response regulatory domain-containing protein.
    
 0.845
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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