STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL04573Putative Agmatinase 1; Belongs to the arginase family. (392 aa)    
Predicted Functional Partners:
ASPCAL12622
Putative Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.921
ASPCAL12946
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.875
ASPCAL08477
Putative Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.875
ASPCAL01360
Putative Porphyromonas-type peptidyl-arginine deiminase superfamily.
    
 0.859
ASPCAL00676
Phenylalanine ammonia-lyase.
  
 
 0.833
ASPCAL08571
Phenylalanine ammonia-lyase.
  
 
 0.833
ASPCAL05560
Putative Arginase family protein; Belongs to the arginase family.
  
  
 
0.819
ASPCAL03822
Putative Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.810
ASPCAL06232
Ornithine aminotransferase.
  
 0.781
ASPCAL10444
Putative Argininosuccinate lyase.
     
 0.772
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.