STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL04700Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
ASPCAL03904
Putative Nucleoporin Nsp1.
   
 0.999
ASPCAL03610
Putative Cullin protein.
   
 0.958
ASPCAL04521
Putative Nuclear pore complex protein AN-Nup192 (Eurofung).
   
 0.955
ASPCAL07819
Putative Non-repetitive nucleoporin.
   
 0.955
ASPCAL08981
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.954
ASPCAL09295
Putative Nuclear pore complex protein An-Nup57 (Eurofung).
   
 0.954
ASPCAL03628
Uncharacterized protein.
   
 0.953
ASPCAL03657
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.952
ASPCAL08735
Putative Poly(A) RNA export protein.
    
 0.949
ASPCAL01016
Putative Complex: the Seh1 protein from S. cerevisiae interacts with Nup84; Belongs to the WD repeat SEC13 family.
    
 0.948
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.