STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL09917Trafficking protein particle complex subunit BET3. (190 aa)    
Predicted Functional Partners:
ASPCAL00580
Putative Trafficking protein particle complex subunit 2/Sedlin.
    
 0.999
ASPCAL05669
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
ASPCAL04531
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
   
 0.999
ASPCAL03631
Uncharacterized protein.
    
 0.999
ASPCAL01195
Putative Hypercellular protein HypA.
    
 0.999
ASPCAL05421
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
ASPCAL11968
Putative TRAPP complex protein TRS85.
    
 0.999
ASPCAL09278
Uncharacterized protein.
    
 0.999
ASPCAL08740
Uncharacterized protein.
    
 0.998
ASPCAL11135
Uncharacterized protein.
    
 0.995
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.