STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL10514Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
ASPCAL01274
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.927
ASPCAL00728
t-SNARE coiled-coil homology domain-containing protein.
    
 0.774
ASPCAL10325
Myb-like domain-containing protein.
    
 0.666
ASPCAL12491
Putative L-PSP endoribonuclease family protein.
    
 0.666
ASPCAL07882
Putative L-PSP endoribonuclease family protein.
    
 0.666
ASPCAL10969
Putative Ribosomal assembly complex component Ipi3.
  
  0.613
ASPCAL06700
Uncharacterized protein.
     
 0.580
ASPCAL10515
Putative Replication factor C subunit 2.
 
  
   0.490
ASPCAL04342
MHYT domain-containing protein.
    
  0.456
ASPCAL01529
Putative Pre-rRNA-processing protein ipi1.
    
  0.447
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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