Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASPCAL02136 | ASPCAL03796 | A0A0U5HEK5 | A0A0U4YZ76 | annotation not available | Putative RAD52 DNA repair protein RADC. | 0.923 |
ASPCAL02136 | ASPCAL03973 | A0A0U5HEK5 | A0A0U5C4E7 | annotation not available | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.874 |
ASPCAL02136 | ASPCAL04520 | A0A0U5HEK5 | A0A0U5GRB9 | annotation not available | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.928 |
ASPCAL02136 | ASPCAL06830 | A0A0U5HEK5 | A0A0U5G194 | annotation not available | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.930 |
ASPCAL02136 | ASPCAL07306 | A0A0U5HEK5 | A0A0U5G4W5 | annotation not available | Putative DNA helicase (Eurofung). | 0.629 |
ASPCAL02136 | ASPCAL08420 | A0A0U5HEK5 | A0A0U5GUC3 | annotation not available | Putative DNA helicase and DNA-dependent ATPase (Eurofung). | 0.579 |
ASPCAL02136 | ASPCAL08862 | A0A0U5HEK5 | A0A0U5CR64 | annotation not available | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.900 |
ASPCAL02136 | ASPCAL10559 | A0A0U5HEK5 | A0A0U5CCH4 | annotation not available | Putative 5'-3' exonuclease and flap-endonuclease (Eurofung). | 0.970 |
ASPCAL02136 | ASPCAL10581 | A0A0U5HEK5 | A0A0U5G6V6 | annotation not available | DUF1767 domain-containing protein. | 0.834 |
ASPCAL02136 | ASPCAL13418 | A0A0U5HEK5 | A0A0U5CHN2 | annotation not available | Uncharacterized protein. | 0.771 |
ASPCAL03796 | ASPCAL02136 | A0A0U4YZ76 | A0A0U5HEK5 | Putative RAD52 DNA repair protein RADC. | annotation not available | 0.923 |
ASPCAL03796 | ASPCAL03973 | A0A0U4YZ76 | A0A0U5C4E7 | Putative RAD52 DNA repair protein RADC. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.886 |
ASPCAL03796 | ASPCAL04520 | A0A0U4YZ76 | A0A0U5GRB9 | Putative RAD52 DNA repair protein RADC. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.934 |
ASPCAL03796 | ASPCAL06830 | A0A0U4YZ76 | A0A0U5G194 | Putative RAD52 DNA repair protein RADC. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.887 |
ASPCAL03796 | ASPCAL07306 | A0A0U4YZ76 | A0A0U5G4W5 | Putative RAD52 DNA repair protein RADC. | Putative DNA helicase (Eurofung). | 0.814 |
ASPCAL03796 | ASPCAL08420 | A0A0U4YZ76 | A0A0U5GUC3 | Putative RAD52 DNA repair protein RADC. | Putative DNA helicase and DNA-dependent ATPase (Eurofung). | 0.943 |
ASPCAL03796 | ASPCAL08862 | A0A0U4YZ76 | A0A0U5CR64 | Putative RAD52 DNA repair protein RADC. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.992 |
ASPCAL03796 | ASPCAL10559 | A0A0U4YZ76 | A0A0U5CCH4 | Putative RAD52 DNA repair protein RADC. | Putative 5'-3' exonuclease and flap-endonuclease (Eurofung). | 0.907 |
ASPCAL03796 | ASPCAL10581 | A0A0U4YZ76 | A0A0U5G6V6 | Putative RAD52 DNA repair protein RADC. | DUF1767 domain-containing protein. | 0.886 |
ASPCAL03796 | ASPCAL13418 | A0A0U4YZ76 | A0A0U5CHN2 | Putative RAD52 DNA repair protein RADC. | Uncharacterized protein. | 0.701 |
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