STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL01293Putative GAS2 domain protein (AFU_orthologue AFUA_6G03990). (1474 aa)    
Predicted Functional Partners:
ASPCAL07376
Putative mRNA export factor mex67.
    
  0.966
ASPCAL05898
Putative Nuclear protein export factor.
    
   0.811
ASPCAL05907
Erf4 domain-containing protein.
    
 0.561
ASPCAL06548
Uncharacterized protein.
  
 
  0.549
MED16
Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
  0.534
ASPCAL11460
Uncharacterized protein.
  
 
  0.530
ASPCAL06882
ANK_REP_REGION domain-containing protein.
    
  0.516
ASPCAL11580
Putative Polo-like kinase.
  
 
 0.507
ASPCAL12667
Putative SH3 domain containing protein.
  
 
  0.506
ASPCAL00576
Protein kinase domain-containing protein.
  
 
   0.496
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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