ASPCAL04564 protein (Aspergillus calidoustus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASPCAL04564

Uncharacterized protein. (129 aa)

Predicted Functional Partners:

ASPCAL09365

0.472

ASPCAL01621

0.472

ASPCAL01622

0.472

ASPCAL06783

0.472

ASPCAL06877

0.472

ASPCAL06808

0.472

ASPCAL12433

0.472

ASPCAL08351

0.472

Your Current Organism:

Aspergillus calidoustus

NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASPCAL01621	ASPCAL04564	A0A0U5FUP9	A0A0U5FV50	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.472
ASPCAL01622	ASPCAL04564	A0A0U5FY63	A0A0U5FV50	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.472
ASPCAL04564	ASPCAL01621	A0A0U5FV50	A0A0U5FUP9	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.472
ASPCAL04564	ASPCAL01622	A0A0U5FV50	A0A0U5FY63	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.472
ASPCAL04564	ASPCAL06783	A0A0U5FV50	A0A0U5G143	Uncharacterized protein.	Uncharacterized protein.	0.472
ASPCAL04564	ASPCAL06808	A0A0U5FV50	A0A0U5G1U5	Uncharacterized protein.	Putative C6 transcription factor.	0.472
ASPCAL04564	ASPCAL06877	A0A0U5FV50	A0A0U5G1D0	Uncharacterized protein.	Uncharacterized protein.	0.472
ASPCAL04564	ASPCAL08351	A0A0U5FV50	A0A0U5GPY4	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.472
ASPCAL04564	ASPCAL09365	A0A0U5FV50	A0A0U5CRV3	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.472
ASPCAL04564	ASPCAL12433	A0A0U5FV50	A0A0U5GHC4	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.472
ASPCAL06783	ASPCAL04564	A0A0U5G143	A0A0U5FV50	Uncharacterized protein.	Uncharacterized protein.	0.472
ASPCAL06808	ASPCAL04564	A0A0U5G1U5	A0A0U5FV50	Putative C6 transcription factor.	Uncharacterized protein.	0.472
ASPCAL06877	ASPCAL04564	A0A0U5G1D0	A0A0U5FV50	Uncharacterized protein.	Uncharacterized protein.	0.472
ASPCAL08351	ASPCAL04564	A0A0U5GPY4	A0A0U5FV50	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.472
ASPCAL09365	ASPCAL04564	A0A0U5CRV3	A0A0U5FV50	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.472
ASPCAL12433	ASPCAL04564	A0A0U5GHC4	A0A0U5FV50	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.472