STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL04150zf-C3H1 domain-containing protein. (1280 aa)    
Predicted Functional Partners:
ASPCAL03819
Putative ATP-dependent RNA helicase DOB1.
    
 
 0.957
ASPCAL09099
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.900
ASPCAL09592
Uncharacterized protein.
   
 
 0.900
ASPCAL00865
Putative Translation repressor.
    
 
 0.849
ASPCAL02553
Putative YTH domain-containing protein.
   
 
 0.831
ASPCAL00864
Putative Importin-7.
    
 
 0.830
ASPCAL09593
Uncharacterized protein.
    
 
 0.830
ASPCAL00153
Putative CCCH zinc finger and RRM domain protein (AFU_orthologue AFUA_2G13540).
   
 
 0.788
ASPCAL12556
Putative U2 snRNP component prp10.
   
    0.739
ASPCAL05627
C2H2-type domain-containing protein.
    
 
 0.658
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.