Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASPCAL00814 | ASPCAL05951 | A0A0U5C1L3 | A0A0U5C7Z4 | Putative Cytidine and deoxycytidylate deaminase zinc-binding domain protein. | Putative RNA helicase. | 0.536 |
ASPCAL00814 | NCS6 | A0A0U5C1L3 | A0A0U5G246 | Putative Cytidine and deoxycytidylate deaminase zinc-binding domain protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.777 |
ASPCAL00814 | SPB1 | A0A0U5C1L3 | A0A0U5GR59 | Putative Cytidine and deoxycytidylate deaminase zinc-binding domain protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.461 |
ASPCAL01906 | ASPCAL03106 | A0A0U5GNB8 | A0A0U5GQF3 | Putative GMP synthase. | Uncharacterized protein. | 0.480 |
ASPCAL01906 | ASPCAL05951 | A0A0U5GNB8 | A0A0U5C7Z4 | Putative GMP synthase. | Putative RNA helicase. | 0.807 |
ASPCAL01906 | ASPCAL11437 | A0A0U5GNB8 | A0A0U5GCD1 | Putative GMP synthase. | Putative Nucleolar protein 12. | 0.493 |
ASPCAL01906 | NCS6 | A0A0U5GNB8 | A0A0U5G246 | Putative GMP synthase. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.795 |
ASPCAL01906 | SPB1 | A0A0U5GNB8 | A0A0U5GR59 | Putative GMP synthase. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.641 |
ASPCAL03106 | ASPCAL01906 | A0A0U5GQF3 | A0A0U5GNB8 | Uncharacterized protein. | Putative GMP synthase. | 0.480 |
ASPCAL03106 | ASPCAL05816 | A0A0U5GQF3 | A0A0U5FYN8 | Uncharacterized protein. | Putative Nucleolar protein 16. | 0.678 |
ASPCAL03106 | ASPCAL05951 | A0A0U5GQF3 | A0A0U5C7Z4 | Uncharacterized protein. | Putative RNA helicase. | 0.831 |
ASPCAL03106 | ASPCAL11437 | A0A0U5GQF3 | A0A0U5GCD1 | Uncharacterized protein. | Putative Nucleolar protein 12. | 0.815 |
ASPCAL03106 | NCS2 | A0A0U5GQF3 | A0A0U5GR87 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.796 |
ASPCAL03106 | NCS6 | A0A0U5GQF3 | A0A0U5G246 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.794 |
ASPCAL03106 | SPB1 | A0A0U5GQF3 | A0A0U5GR59 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.918 |
ASPCAL05816 | ASPCAL03106 | A0A0U5FYN8 | A0A0U5GQF3 | Putative Nucleolar protein 16. | Uncharacterized protein. | 0.678 |
ASPCAL05816 | ASPCAL05951 | A0A0U5FYN8 | A0A0U5C7Z4 | Putative Nucleolar protein 16. | Putative RNA helicase. | 0.902 |
ASPCAL05816 | ASPCAL11437 | A0A0U5FYN8 | A0A0U5GCD1 | Putative Nucleolar protein 16. | Putative Nucleolar protein 12. | 0.840 |
ASPCAL05816 | NCS2 | A0A0U5FYN8 | A0A0U5GR87 | Putative Nucleolar protein 16. | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.789 |
ASPCAL05816 | NCS6 | A0A0U5FYN8 | A0A0U5G246 | Putative Nucleolar protein 16. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.779 |
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