STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL06379BRCT domain-containing protein. (396 aa)    
Predicted Functional Partners:
ASPCAL06549
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.978
ASPCAL10554
Putative SMAD6 interacting protein AMSH.
    
 0.921
ASPCAL10817
Uncharacterized protein.
   
 0.916
ASPCAL06550
Putative Ubiquitin carbon terminal hydrolase.
    
 0.903
ASPCAL12195
Putative Strain CBS138 chromosome G complete sequence.
    
  0.874
ASPCAL03667
Putative Transcription factor bzip.
   
 0.861
ASPCAL11203
Putative Ubiquitin/79aa fusion protein.
   
 0.861
ASPCAL06672
Putative Nuclear protein.
    
 0.846
ASPCAL06492
Putative FACL062Cp.
    
 0.846
ASPCAL03875
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.831
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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