STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL10907Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
ASPCAL13922
Putative Ubiquitin-protein ligase Ufd4.
   
 0.994
ASPCAL12121
Putative Ubiquitin-activating enzyme; Belongs to the ubiquitin-activating E1 family.
   
 0.984
ASPCAL12195
Putative Strain CBS138 chromosome G complete sequence.
   
 0.966
ASPCAL05441
Putative RING-box protein 1 (Broad).
    
 0.959
ASPCAL02149
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.958
ASPCAL10984
Putative Ubiquitin thiolesterase (OtuB1).
    
 0.956
ASPCAL00995
Putative U-box domain protein.
    
 0.952
ASPCAL09778
Putative RING finger domain-containing protein.
    
 0.938
ASPCAL09779
Uncharacterized protein.
    
 0.938
ASPCAL03667
Putative Transcription factor bzip.
   
 0.936
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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