STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL12206Zn(2)-C6 fungal-type domain-containing protein. (786 aa)    
Predicted Functional Partners:
ASPCAL06691
Urb2 domain-containing protein.
  
     0.478
ASPCAL10728
Uncharacterized protein.
  
     0.470
ASPCAL01819
Uncharacterized protein.
  
     0.457
ASPCAL02465
KIX_2 domain-containing protein.
  
     0.454
ASPCAL02307
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
     0.444
ASPCAL11157
Uncharacterized protein.
  
     0.433
ASPCAL02709
Uncharacterized protein.
  
     0.433
ASPCAL11227
Uncharacterized protein.
  
     0.426
ASPCAL12601
Uncharacterized protein.
  
     0.423
ASPCAL05788
Uncharacterized protein.
  
     0.417
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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