STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL02202Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
ASPCAL03106
Uncharacterized protein.
   
 0.990
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.832
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.828
ASPCAL10737
RNA helicase.
   
   0.811
ASPCAL00231
Putative Pre-rRNA processing protein Tsr1.
   
    0.790
ASPCAL03507
Putative 60S ribosomal protein L7.
   
   0.773
ASPCAL00650
Putative Pectate lyase F.
   
    0.772
ASPCAL02740
Putative Periodic tryptophan protein 2.
   
    0.772
ASPCAL03978
Putative 60S ribosomal protein L24b (AFU_orthologue AFUA_2G02710).
   
    0.770
ASPCAL03857
Putative WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
    0.766
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.