STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL02040Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
ASPCAL07020
Ribosomal_S7 domain-containing protein.
   
 
 0.826
ASPCAL03828
37S ribosomal protein S25, mitochondrial.
   
 
 0.822
ASPCAL04381
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.819
ASPCAL02112
BZIP domain-containing protein.
    
 0.818
ASPCAL00736
Uncharacterized protein.
   
 
 0.808
ASPCAL02522
Uncharacterized protein.
   
 
 0.803
ASPCAL08781
Putative 50S ribosomal protein L17 (AFU_orthologue AFUA_1G09410); Belongs to the bacterial ribosomal protein bL17 family.
   
   0.801
ASPCAL04359
Putative Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.785
ASPCAL06202
Putative Ribosomal protein; Belongs to the universal ribosomal protein uL6 family.
    
  0.781
ASPCAL04162
Putative 37S ribosomal protein S12.
   
 
 0.759
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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