STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL01991Putative Isocitrate lyase. (419 aa)    
Predicted Functional Partners:
ASPCAL01337
Malate synthase; Belongs to the malate synthase family.
 
 
 0.975
ASPCAL01990
Putative Isocitrate lyase.
 
     0.951
ASPCAL08788
Putative Aminotransferase.
  
 
 0.863
ASPCAL01829
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.841
ASPCAL14689
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.776
ASPCAL09851
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.770
ASPCAL01438
Isocitrate lyase.
  
  
 
0.764
ASPCAL01842
Putative Hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.756
ASPCAL07946
Putative Glyoxylate/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.756
ASPCAL09542
Putative Glyoxylate/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.756
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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