STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL03180Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (341 aa)    
Predicted Functional Partners:
ASPCAL06580
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.678
ASPCAL05937
Putative Kinase activator.
    
 0.666
ASPCAL10130
Carrier domain-containing protein.
    
 0.561
ASPCAL03075
Putative Polyketide synthase.
    
 0.561
ASPCAL11726
Putative Serine/threonine-protein kinase atg1.
    
 
 0.431
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.