STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPCAL08775Uncharacterized protein. (711 aa)    
Predicted Functional Partners:
ASPCAL09871
Putative ATP-dependent rna helicase dhh1; Belongs to the DEAD box helicase family.
  
 
 0.764
ASPCAL11444
Putative mRNA cleavage and polyadenylation factor II complex, subunit PTA1.
    
 0.758
ASPCAL00474
Nuclear cap-binding protein subunit 2.
   
  0.729
ASPCAL11497
Small nuclear ribonucleoprotein G.
    
  0.727
ASPCAL06587
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.725
ASPCAL04651
Putative U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue AFUA_5G13480).
  
 0.724
ASPCAL06244
Small nuclear ribonucleoprotein Sm D2.
    
  0.718
ASPCAL07823
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.713
ASPCAL01164
Putative Nuclear cap-binding complex.
    
  0.712
ASPCAL12339
Uncharacterized protein.
    
 0.711
Your Current Organism:
Aspergillus calidoustus
NCBI taxonomy Id: 454130
Other names: A. calidoustus, Aspergillus calidoustus Varga, Houbraken & Samson 2008, Aspergillus sp. JV-2007c, CBS 121601
Server load: low (20%) [HD]