STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH16928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)    
Predicted Functional Partners:
OKH16929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
ccsB
Cytochrome C biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
       0.503
Your Current Organism:
Limnothrix rosea
NCBI taxonomy Id: 454133
Other names: L. rosea IAM M-220, Limnothrix rosea IAM M-220, Oscillatoria rosea IAM M-220, Oscillatoria rosea NGS-1, Oscillatoria rosea NIES-208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.