STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH15212.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (107 aa)    
Predicted Functional Partners:
OKH17377.1
Ankryin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.897
OKH17076.1
Bile acid beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.861
OKH11156.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.855
OKH18712.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.819
OKH18728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.809
OKH18729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.809
OKH11752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.809
OKH16035.1
Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.715
OKH13846.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.591
OKH18180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.575
Your Current Organism:
Limnothrix rosea
NCBI taxonomy Id: 454133
Other names: L. rosea IAM M-220, Limnothrix rosea IAM M-220, Oscillatoria rosea IAM M-220, Oscillatoria rosea NGS-1, Oscillatoria rosea NIES-208
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.