STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK12517.1CDP-diglyceride synthetase; PFAM: Cytidylyltransferase family; JGI identifier:CP488_00066. (294 aa)    
Predicted Functional Partners:
CEK19564.1
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 0.964
CEK16346.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; JGI identifier:CP488_01476.
 
  
 0.934
CEK19199.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; JGI identifier:CP488_02440.
 
  
 0.933
CEK14643.1
PFAM: CDP-alcohol phosphatidyltransferase; JGI identifier:CP488_00904.
    
 0.928
CEK12731.1
PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily; JGI identifier:CP488_00173.
    
 0.914
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
 
  
 0.849
CEK12520.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: MobA-like NTP transferase domain; JGI identifier:CP488_00068.
  
  
 0.797
CEK12518.1
PFAM: Major Facilitator Superfamily; JGI identifier:CP488_00067.
       0.773
CEK19557.1
Predicted membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; PDZ domain; TIGRFAM: RIP metalloprotease RseP; JGI identifier:CP488_02561.
  
    0.649
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
  
 0.633
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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