STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK13324.1Predicted N-acetylglucosamine kinase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; JGI identifier:CP488_00461. (326 aa)    
Predicted Functional Partners:
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.804
CEK13931.1
PFAM: Amidohydrolase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; JGI identifier:CP488_00668.
 
  
 0.702
CEK13982.1
PFAM: Protein of unknown function (DUF1343); JGI identifier:CP488_00685.
 
    0.588
CEK13321.1
Molecular chaperone; PFAM: Hsp70 protein; JGI identifier:CP488_00460.
       0.556
CEK13642.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase; JGI identifier:CP488_00569.
 
    0.548
CEK13327.1
Hypothetical protein; JGI identifier:CP488_00462.
       0.533
CEK13318.1
PFAM: TPR repeat; JGI identifier:CP488_00459.
       0.466
CEK13313.1
TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; JGI identifier:CP488_00458.
     
 0.447
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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