Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEK12522.1 | CEK13489.1 | CP488_00069 | CP488_00516 | Thiol-disulfide isomerase-like thioredoxin; PFAM: Predicted periplasmic protein (DUF2092); AhpC/TSA family; JGI identifier:CP488_00069. | Peroxiredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00516. | 0.762 |
| CEK12522.1 | CEK20395.1 | CP488_00069 | CP488_02842 | Thiol-disulfide isomerase-like thioredoxin; PFAM: Predicted periplasmic protein (DUF2092); AhpC/TSA family; JGI identifier:CP488_00069. | Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin; JGI identifier:CP488_02842. | 0.610 |
| CEK13478.1 | CEK13481.1 | CP488_00512 | CP488_00513 | Hypothetical protein; JGI identifier:CP488_00512. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.648 |
| CEK13478.1 | CEK13486.1 | CP488_00512 | CP488_00515 | Hypothetical protein; JGI identifier:CP488_00512. | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.536 |
| CEK13478.1 | CEK13489.1 | CP488_00512 | CP488_00516 | Hypothetical protein; JGI identifier:CP488_00512. | Peroxiredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00516. | 0.519 |
| CEK13478.1 | CEK13493.1 | CP488_00512 | CP488_00517 | Hypothetical protein; JGI identifier:CP488_00512. | PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); JGI identifier:CP488_00517. | 0.519 |
| CEK13478.1 | CEK13495.1 | CP488_00512 | CP488_00518 | Hypothetical protein; JGI identifier:CP488_00512. | Predicted dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; JGI identifier:CP488_00518. | 0.519 |
| CEK13478.1 | dnaG | CP488_00512 | CP488_00514 | Hypothetical protein; JGI identifier:CP488_00512. | DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.543 |
| CEK13481.1 | CEK13478.1 | CP488_00513 | CP488_00512 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; JGI identifier:CP488_00512. | 0.648 |
| CEK13481.1 | CEK13486.1 | CP488_00513 | CP488_00515 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.633 |
| CEK13481.1 | CEK13489.1 | CP488_00513 | CP488_00516 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Peroxiredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00516. | 0.612 |
| CEK13481.1 | CEK13493.1 | CP488_00513 | CP488_00517 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); JGI identifier:CP488_00517. | 0.612 |
| CEK13481.1 | CEK13495.1 | CP488_00513 | CP488_00518 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Predicted dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; JGI identifier:CP488_00518. | 0.612 |
| CEK13481.1 | dnaG | CP488_00513 | CP488_00514 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.962 |
| CEK13486.1 | CEK13478.1 | CP488_00515 | CP488_00512 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Hypothetical protein; JGI identifier:CP488_00512. | 0.536 |
| CEK13486.1 | CEK13481.1 | CP488_00515 | CP488_00513 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.633 |
| CEK13486.1 | CEK13489.1 | CP488_00515 | CP488_00516 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Peroxiredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00516. | 0.746 |
| CEK13486.1 | CEK13493.1 | CP488_00515 | CP488_00517 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); JGI identifier:CP488_00517. | 0.746 |
| CEK13486.1 | CEK13495.1 | CP488_00515 | CP488_00518 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Predicted dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; JGI identifier:CP488_00518. | 0.746 |
| CEK13486.1 | dnaG | CP488_00515 | CP488_00514 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.762 |
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