STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK13677.1UDP-galactose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase C-term subunit; TIGRFAM: UDP-glucose-4-epimerase GalE; JGI identifier:CP488_00582; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (324 aa)    
Predicted Functional Partners:
CEK17970.1
PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1; JGI identifier:CP488_02025.
  
 0.994
CEK18443.1
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; JGI identifier:CP488_02186.
  
 0.939
CEK17270.1
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; JGI identifier:CP488_01796.
 
  
 0.938
CEK13226.1
PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; JGI identifier:CP488_00425.
 
 
 0.929
CEK16907.1
PFAM: NAD dependent epimerase/dehydratase family; JGI identifier:CP488_01671.
 
0.925
CEK13389.1
Histidinol-phosphate phosphatase family protein; PFAM: HAD-hyrolase-like; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; JGI identifier:CP488_00482.
    
 0.890
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.849
CEK13216.1
PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; JGI identifier:CP488_00420.
 
 
 0.847
CEK14227.1
PFAM: Aldose 1-epimerase; JGI identifier:CP488_00769.
 
  
 0.803
CEK13674.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
    
 0.786
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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