STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAmethionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (158 aa)    
Predicted Functional Partners:
msrB
PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; JGI identifier:CP488_00957; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.991
CEK20395.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin; JGI identifier:CP488_02842.
   
 0.905
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.891
CEK12588.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00102.
   
 0.838
CEK12628.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00122.
   
 0.838
CEK14282.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family; JGI identifier:CP488_00788.
   
 0.838
CEK19857.1
Glutaredoxin-like protein; PFAM: Glutaredoxin; JGI identifier:CP488_02662.
 
 
 0.825
CEK15853.1
Thiol:disulfide interchange protein; PFAM: Thioredoxin-like domain; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; JGI identifier:CP488_01309.
    
 
 0.796
CEK17674.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
   0.756
CEK13860.1
Aspartate kinase; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase; JGI identifier:CP488_00643; Belongs to the aspartokinase family.
  
  
 0.548
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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