STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK14356.1HAF family repeat protein; PFAM: AhpC/TSA family; TIGRFAM: probable extracellular repeat, HAF family; JGI identifier:CP488_00812. (510 aa)    
Predicted Functional Partners:
CEK14360.1
PFAM: Protein of unknown function (DUF1573); JGI identifier:CP488_00813.
       0.773
pqqC
Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
       0.732
CEK14350.1
PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; JGI identifier:CP488_00810.
       0.732
pqqE
Coenzyme PQQ biosynthesis enzyme PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
       0.732
CEK14342.1
PFAM: Legume lectin domain; Fibronectin type III domain; JGI identifier:CP488_00807.
 
     0.728
pqqB
Metal-dependent hydrolase, beta-lactamase superfamily I; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
       0.680
CEK15975.1
Hypothetical protein; JGI identifier:CP488_01350.
  
     0.613
CEK18040.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); JGI identifier:CP488_02048.
  
     0.488
CEK14601.1
Hypothetical protein; JGI identifier:CP488_00891.
  
     0.448
CEK16578.1
Hypothetical protein; JGI identifier:CP488_01556.
  
     0.413
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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