STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK14629.1ABC-type metal ion transport system, ATPase component; PFAM: NIL domain; JGI identifier:CP488_00900. (85 aa)    
Predicted Functional Partners:
CEK14075.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.926
CEK14144.1
PFAM: Homocysteine S-methyltransferase; JGI identifier:CP488_00739.
   
 
 0.926
CEK12919.1
PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; JGI identifier:CP488_00268.
   
 
 0.907
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
   
 
  0.901
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
     
 0.900
CEK19219.1
ABC-type metal ion transport system, ATPase component; PFAM: NIL domain; JGI identifier:CP488_02448.
     
  0.900
CEK14896.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthase; JGI identifier:CP488_00985.
    
 0.815
CEK18966.1
PFAM: 56kDa selenium binding protein (SBP56); JGI identifier:CP488_02360.
     
  0.800
CEK14626.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase; JGI identifier:CP488_00899.
       0.598
CEK14398.1
PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; JGI identifier:CP488_00825; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.590
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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