STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK14645.1Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family; JGI identifier:CP488_00905. (240 aa)    
Predicted Functional Partners:
CEK14649.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; JGI identifier:CP488_00906.
       0.773
CEK13584.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.734
CEK14643.1
PFAM: CDP-alcohol phosphatidyltransferase; JGI identifier:CP488_00904.
       0.703
CEK14639.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_00903.
       0.701
CEK19656.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4; JGI identifier:CP488_02594.
  
     0.606
CEK18707.1
PFAM: Protein of unknown function (DUF3866); JGI identifier:CP488_02276.
  
     0.558
CEK19664.1
Uncharacterized membrane-anchored protein; JGI identifier:CP488_02597.
  
     0.533
CEK16139.1
Phosphoglycerate mutase; JGI identifier:CP488_01406.
  
     0.530
CEK13327.1
Hypothetical protein; JGI identifier:CP488_00462.
  
     0.517
CEK19662.1
PFAM: Protein of unknown function (DUF3186); JGI identifier:CP488_02596.
  
     0.509
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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