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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK15041.1Protein-disulfide isomerase; PFAM: Thioredoxin; Vitamin K epoxide reductase family; JGI identifier:CP488_01034. (426 aa)    
Predicted Functional Partners:
CEK15045.1
PFAM: Carboxypeptidase regulatory-like domain; JGI identifier:CP488_01035.
       0.773
CEK15853.1
Thiol:disulfide interchange protein; PFAM: Thioredoxin-like domain; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; JGI identifier:CP488_01309.
  
 
 0.662
CEK15039.1
PFAM: DinB superfamily; JGI identifier:CP488_01033.
       0.598
CEK20395.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin; JGI identifier:CP488_02842.
  
 
 0.550
CEK15035.1
Putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
       0.497
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.467
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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