STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (86 aa)    
Predicted Functional Partners:
CEK15334.1
Flagellar biosynthesis pathway, component FliR; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; JGI identifier:CP488_01133.
 
 
 0.999
CEK13558.1
Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; JGI identifier:CP488_00539.
 
  
 0.998
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.998
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
 
 0.994
CEK20445.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; JGI identifier:CP488_02859; Belongs to the flagella basal body rod proteins family.
 
 
 0.993
CEK20439.1
Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.991
CEK17874.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook-basal body protein; JGI identifier:CP488_01994.
 
 
 0.990
CEK15349.1
Flagellar biosynthesis pathway, component FlhB; PFAM: FlhB HrpN YscU SpaS Family; JGI identifier:CP488_01138.
 
 
 0.979
CEK20448.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.978
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.975
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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