STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK15870.1Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain; JGI identifier:CP488_01315. (292 aa)    
Predicted Functional Partners:
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.928
CEK17962.1
Cystathionine gamma-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme; JGI identifier:CP488_02022.
 
 
 0.924
CEK12737.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; JGI identifier:CP488_00176.
   
 0.916
CEK20272.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; JGI identifier:CP488_02802.
   
 0.916
CEK13056.1
L-aspartate aminotransferase apoenzyme; PFAM: Aminotransferase class I and II; JGI identifier:CP488_00338.
     
 0.903
CEK14896.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthase; JGI identifier:CP488_00985.
  
 
 0.839
CEK18966.1
PFAM: 56kDa selenium binding protein (SBP56); JGI identifier:CP488_02360.
     
  0.800
CEK15874.1
Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; JGI identifier:CP488_01316.
  
    0.732
CEK19278.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; JGI identifier:CP488_02469.
 
 
 0.578
CEK13792.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; JGI identifier:CP488_00621.
   
 
 0.566
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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