STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK16080.1Isochorismate hydrolase; PFAM: Isochorismatase family; JGI identifier:CP488_01385. (201 aa)    
Predicted Functional Partners:
CEK16077.1
Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; JGI identifier:CP488_01384.
  
    0.775
CEK18911.1
yjeF-like protein, hydroxyethylthiazole kinase-related; PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; JGI identifier:CP488_02343.
   
    0.548
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
 
 0.516
CEK17146.1
Predicted amidohydrolase; PFAM: Carbon-nitrogen hydrolase; JGI identifier:CP488_01751.
  
 
 0.516
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; JGI identifier:CP488_00273; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   0.515
CEK16086.1
PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; JGI identifier:CP488_01387.
  
    0.474
CEK16083.1
PFAM: PQQ-like domain; JGI identifier:CP488_01386.
       0.473
CEK13243.1
biotin-(acetyl-CoA carboxylase) ligase; PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; JGI identifier:CP488_00434.
     
 0.470
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.432
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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