STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK16286.1Uncharacterized membrane protein; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355); JGI identifier:CP488_01457. (1003 aa)    
Predicted Functional Partners:
CEK12681.1
26S proteasome regulatory complex, subunit RPN10/PSMD4; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal; JGI identifier:CP488_00148.
     0.928
CEK13037.1
Hypothetical protein; JGI identifier:CP488_00328.
 
     0.786
CEK14280.1
PFAM: Protein of unknown function DUF58; JGI identifier:CP488_00787.
 
     0.774
CEK13030.1
PFAM: ABC-2 family transporter protein; JGI identifier:CP488_00325.
 
     0.772
CEK13028.1
Hypothetical protein; JGI identifier:CP488_00324.
  
    0.767
CEK13034.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC-2 family transporter protein; JGI identifier:CP488_00327.
 
     0.763
CEK13033.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; JGI identifier:CP488_00326.
  
     0.725
CEK16283.1
Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; JGI identifier:CP488_01456.
       0.631
CEK18902.1
PFAM: von Willebrand factor type A domain; JGI identifier:CP488_02340.
  
     0.547
CEK16648.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); JGI identifier:CP488_01580.
  
     0.534
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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