Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEK13435.1 | CEK16790.1 | CP488_00498 | CP488_01628 | Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase; JGI identifier:CP488_00498. | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | 0.416 |
CEK16787.1 | CEK16790.1 | CP488_01627 | CP488_01628 | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | 0.693 |
CEK16787.1 | CEK16797.1 | CP488_01627 | CP488_01630 | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | 0.502 |
CEK16787.1 | lipB | CP488_01627 | CP488_01629 | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.502 |
CEK16790.1 | CEK13435.1 | CP488_01628 | CP488_00498 | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase; JGI identifier:CP488_00498. | 0.416 |
CEK16790.1 | CEK16787.1 | CP488_01628 | CP488_01627 | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | 0.693 |
CEK16790.1 | CEK16797.1 | CP488_01628 | CP488_01630 | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | 0.627 |
CEK16790.1 | lipB | CP488_01628 | CP488_01629 | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.558 |
CEK16797.1 | CEK16787.1 | CP488_01630 | CP488_01627 | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | 0.502 |
CEK16797.1 | CEK16790.1 | CP488_01630 | CP488_01628 | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | 0.627 |
CEK16797.1 | lipB | CP488_01630 | CP488_01629 | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.773 |
lipB | CEK16787.1 | CP488_01629 | CP488_01627 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | PFAM: Peptidase family M48; JGI identifier:CP488_01627. | 0.502 |
lipB | CEK16790.1 | CP488_01629 | CP488_01628 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Protein involved in cellulose biosynthesis (CelD); PFAM: Acetyltransferase (GNAT) domain; JGI identifier:CP488_01628. | 0.558 |
lipB | CEK16797.1 | CP488_01629 | CP488_01630 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_01630. | 0.773 |