STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK16870.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; JGI identifier:CP488_01654. (421 aa)    
Predicted Functional Partners:
CEK14626.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase; JGI identifier:CP488_00899.
  
    0.527
CEK16648.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); JGI identifier:CP488_01580.
  
     0.490
CEK16867.1
Predicted glycosyltransferase; PFAM: PilZ domain; JGI identifier:CP488_01653.
       0.482
CEK14564.1
PFAM: Protein of unknown function (DUF1501); JGI identifier:CP488_00879.
  
     0.455
CEK14567.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); JGI identifier:CP488_00880.
  
     0.440
CEK16651.1
PFAM: Protein of unknown function (DUF1501); JGI identifier:CP488_01581.
  
     0.433
CEK16657.1
PFAM: Bacterial pre-peptidase C-terminal domain; JGI identifier:CP488_01583.
  
     0.410
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.