STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK17806.1Hypothetical protein; JGI identifier:CP488_01972. (156 aa)    
Predicted Functional Partners:
CEK18568.1
Chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of gram positive AroA protein; chorismate mutase domain of proteobacterial P-protein, clade 2; JGI identifier:CP488_02230.
  
  
 0.840
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
     
 0.745
CEK17809.1
PFAM: Protein of unknown function (DUF970); JGI identifier:CP488_01973.
       0.741
CEK17816.1
Hypothetical protein; PFAM: ATPase family associated with various cellular activities (AAA); R3H domain; JGI identifier:CP488_01975.
       0.741
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
  
 0.722
CEK14567.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); JGI identifier:CP488_00880.
  
     0.677
CEK16657.1
PFAM: Bacterial pre-peptidase C-terminal domain; JGI identifier:CP488_01583.
  
     0.675
CEK16648.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); JGI identifier:CP488_01580.
  
     0.660
CEK14564.1
PFAM: Protein of unknown function (DUF1501); JGI identifier:CP488_00879.
  
     0.659
CEK17710.1
Peroxiredoxin; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; AhpC/TSA family; JGI identifier:CP488_01940.
  
     0.645
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.