STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK17920.1PFAM: Rod binding protein; JGI identifier:CP488_02008. (109 aa)    
Predicted Functional Partners:
flgI
Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.983
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.975
flgK
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; JGI identifier:CP488_02006.
  
  
 0.969
CEK17930.1
PFAM: SAF-like; TIGRFAM: flagella basal body P-ring formation protein FlgA; JGI identifier:CP488_02011.
  
  
 0.949
CEK17874.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook-basal body protein; JGI identifier:CP488_01994.
  
  
 0.942
CEK20448.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.941
CEK20436.1
Flagellar motor switch protein FliG; PFAM: FliG middle domain; FliG C-terminal domain; FliG N-terminal domain; TIGRFAM: flagellar motor switch protein FliG; JGI identifier:CP488_02856.
  
  
 0.935
CEK20445.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; JGI identifier:CP488_02859; Belongs to the flagella basal body rod proteins family.
  
  
 0.935
CEK20439.1
Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.920
CEK17934.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; flagellar basal-body rod protein FlgG, Gram-negative bacteria; JGI identifier:CP488_02012.
  
 
 0.912
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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