STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK18878.1Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_02332. (303 aa)    
Predicted Functional Partners:
CEK15687.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_01253.
  
     0.774
CEK18757.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_02293.
  
     0.774
CEK19738.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_02622.
  
     0.774
CEK13292.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_00451.
  
     0.765
CEK16268.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_01451.
  
     0.760
CEK13816.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_00629.
  
     0.633
CEK13418.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_00492.
  
     0.606
CEK18880.1
Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; JGI identifier:CP488_02333.
       0.596
CEK18874.1
Hypothetical protein; PFAM: Trehalose utilisation; JGI identifier:CP488_02331.
       0.586
CEK14432.1
PFAM: Phytanoyl-CoA dioxygenase (PhyH); JGI identifier:CP488_00836.
  
     0.561
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.