STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK18924.1Ribose ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; JGI identifier:CP488_02347; Belongs to the binding-protein-dependent transport system permease family. (353 aa)    
Predicted Functional Partners:
CEK18928.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding protein domain; JGI identifier:CP488_02348.
 0.999
rbsA
ABC-type sugar transport system, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.998
CEK14800.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding protein domain; JGI identifier:CP488_00953.
 0.997
CEK13516.1
PFAM: Periplasmic binding protein domain; JGI identifier:CP488_00525.
 
 0.976
CEK13133.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding protein domain; JGI identifier:CP488_00377.
 0.972
CEK15127.1
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter; JGI identifier:CP488_01063.
 
     0.818
CEK19903.1
ABC-type sugar transport system, periplasmic component; PFAM: Periplasmic binding protein domain; JGI identifier:CP488_02679.
 
 0.806
CEK14478.1
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter; JGI identifier:CP488_00851.
 
     0.794
CEK18920.1
Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; JGI identifier:CP488_02346.
  
    0.662
CEK18935.1
PFAM: Gluconate 2-dehydrogenase subunit 3; JGI identifier:CP488_02350.
       0.496
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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