STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK19008.1L-rhamnulose 1-phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; JGI identifier:CP488_02374. (274 aa)    
Predicted Functional Partners:
CEK20412.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; JGI identifier:CP488_02848.
 
 
 0.984
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.932
CEK15986.1
PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase; JGI identifier:CP488_01354.
  
 
 0.925
CEK19112.1
PFAM: DeoC/LacD family aldolase; JGI identifier:CP488_02410.
    
 0.908
CEK19002.1
Glycogen debranching enzyme; PFAM: Bacterial alpha-L-rhamnosidase; JGI identifier:CP488_02372.
 
     0.773
CEK19005.1
PFAM: Predicted permease YjgP/YjgQ family; JGI identifier:CP488_02373.
       0.741
CEK19012.1
PFAM: Stress responsive A/B Barrel Domain; JGI identifier:CP488_02375.
       0.719
CEK14075.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  
 0.590
CEK14144.1
PFAM: Homocysteine S-methyltransferase; JGI identifier:CP488_00739.
   
  
 0.590
CEK14007.1
FGGY-family pentulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: FGGY-family pentulose kinase; JGI identifier:CP488_00693.
  
  
 0.580
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.