STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK19070.1PFAM: Glycosyl transferase family 2; JGI identifier:CP488_02395. (405 aa)    
Predicted Functional Partners:
CEK19067.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; JGI identifier:CP488_02394; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
    0.775
CEK16915.1
PFAM: Glycosyl transferase family 2; JGI identifier:CP488_01674.
 
   
 0.731
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
    0.700
CEK13507.1
PFAM: Acyltransferase; JGI identifier:CP488_00522.
 
  
 0.637
CEK19190.1
EAL domain-containing protein; PFAM: EAL domain; GGDEF domain; JGI identifier:CP488_02437.
  
  
 0.581
CEK20012.1
Tetratricopeptide repeat protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase); Tetratricopeptide repeat; TPR repeat; JGI identifier:CP488_02715.
  
 
 0.577
CEK16944.1
PFAM: Glycosyl transferase family 2; JGI identifier:CP488_01684.
  
    0.566
CEK14435.1
PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyltransferase like family 2; JGI identifier:CP488_00837.
 
  
0.539
CEK20638.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase; JGI identifier:CP488_02920.
  
  
 0.525
CEK12590.1
PAS domain S-box; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; JGI identifier:CP488_00103.
  
  
 0.519
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.